Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946952.1_cds_XP_016488877.1_79460
CDS Infomation

[gene=LOC107808828] [db_xref=GeneID:107808828] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016488877.1] [location=join(24813..25736,26481..27119)] [gbkey=CDS]
Sequence

ATGGAAATCCAGACATCTTTCTTCGTTTCCATTTTCCTTGTACTGTTACCCTTATGTTTC
ATAATAATCAAAGGGTACAACAAATATGCTAAGAGTAAGCAGAAATTGCCACCAGGGCCG
AGGAAGCTCCCACTGATCGGGAACTTGCACCAACTGCTCTGCCTCGGATCATCTGAGTTC
CAACCACATGTTGCTCTGAGTAAATTAGCAGCTAAGTACGGACCTTTGATGCACCTAAAG
CTCGGTCAACGTTTGGTTCTTGTAGTTTCATCTGCTGAAGTTTCCAGACAATTTTTCAAA
ACACATGATCTCACTTTCTCTAACCGGCCAGAGCTTTTCGTTGGGAAGATAATGATGTAC
GGTTTTTCTGATATGGCATTCGCTCCATACGGTGACTTCTGGAGACAGATGCGCAAAATT
TGTAACTCGGAACTCCTTGGTCTGAAGAGGATCCACTCGTTTTTTCCTATGATGTTTGAC
GAGGTGCGTGATCTGGTTAAGTCAATTGCAGCTGCAGAAGTAGGGAAACCCATTGACTTG
AATGAAAGACTGAGTTTGTTGCAATTTGCTATCACTTGTAAAGCTGCTGTTGGTAGGACA
GCATGTACAGATCAGGAGTCATTTTTAATGGTAATGAAAGAATTCGTAAGCTTCGCGGGA
ATATTCAGTGCAGCTGATCTTTTTCCTTCCTGGAAAATAGTTCAATTAATTAGTGGCCTA
AAGCGAAAATTAACGAAAATGCATCAGAAGGCTGATCATATTGTTGAACAAATTATACGT
GAACATGAATTGAAGAGAGGAACTGATGGTGATGGTGATGGCAAGCAAATAGAGGAAGAT
ATTGTGGATGTACTTCTGAGACTTAAGGAAAGCAAAGATTTTCCGATTCCTATTACTAGG
AATGTTATCAATGCTACAGTCTTTGAGTTGTTTGTAGCTGGAACTTCAACCTCAGCAACA
GCCATGTTGTGGGCTTTTTCAGAATTGGTAAAGAATCCGAAAATGATGAAGAAAGCACAA
GCTGAAGTGAGACAAGTCTACAAGTTGGGAACAGAAAGGATCGATCAAAGTCACATTCAA
AAGCTAACGTACTTGAGAATGGTAATCAAGGAAACTCTAAGAATTCATCCCCCAGGTCCT
CTTTCATTCGCTAGAGAATCCAGGGAGGAGAGTGAGATCGACGGATATACAATACCAAAT
AAAACCTTAGTGCTACTAAATCTATGGGCAGTTGGAAGAGATCCAAAACACTGGGAAAAT
CCGGAAACATTTGATCCGGATAGGTTTGATGGTAGTCCAATTGAAAGCGTACCAACTCAT
TTTGAGTACACGCCATTTGGTGCAGGAAGAAGAATATGCCCAGGAATATCCTTTGGAATG
GCGAGTGTGGAAGTTTCTCTAGCATTATTGCTCTATCATTTTGACTGGAAACTTCCCAGT
GGGATGAGTCCTCAAGAATTAGACATGACTGAGAAATTTAGTACGAGTCTTGAAAGAAAA
ACTAAGTTGTGCTTGATTGCCTCCCCTTACGTTCCTGTAAATAGGACGACGGATTCGTAT
TAG

Peptide Sequence

PEP ID

XP_016488877.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEIQTSFFVSIFLVLLPLCFIIIKGYNKYAKSKQKLPPGPRKLPLIGNLHQLLCLGSSEF
QPHVALSKLAAKYGPLMHLKLGQRLVLVVSSAEVSRQFFKTHDLTFSNRPELFVGKIMMY
GFSDMAFAPYGDFWRQMRKICNSELLGLKRIHSFFPMMFDEVRDLVKSIAAAEVGKPIDL
NERLSLLQFAITCKAAVGRTACTDQESFLMVMKEFVSFAGIFSAADLFPSWKIVQLISGL
KRKLTKMHQKADHIVEQIIREHELKRGTDGDGDGKQIEEDIVDVLLRLKESKDFPIPITR
NVINATVFELFVAGTSTSATAMLWAFSELVKNPKMMKKAQAEVRQVYKLGTERIDQSHIQ
KLTYLRMVIKETLRIHPPGPLSFARESREESEIDGYTIPNKTLVLLNLWAVGRDPKHWEN
PETFDPDRFDGSPIESVPTHFEYTPFGAGRRICPGISFGMASVEVSLALLLYHFDWKLPS
GMSPQELDMTEKFSTSLERKTKLCLIASPYVPVNRTTDSY

Transcript Sequence

Gene sequence data has not been registered.